Free Text Search
Pattern Matching with Amyloid Sequences
Search if a specific pattern matches with amyloids proteins stored in AmypDB
Example: 'L-[DEGHKNPQRSTY]-x-L-[DEHKNQR]-C-[DEGHKNPQRSTY]-x(2)-[DEHKNPQY]'
Example: 'L-[DEGHKNPQRSTY]-x-L-[DEHKNQR]-C-[DEGHKNPQRSTY]-x(2)-[DEHKNPQY]'
Sequence Matching with Amyloid Patterns
Search if a sequence (FASTA format) matches with amyloids patterns stored in AmypDB
Example: Click to put a sequence in the textarea
Example: Click to put a sequence in the textarea
Advanced Pattern Search
Search Patterns stored in AmypDB for multiple families and with all calculated parameters (Sensitivity, Specificity, Selectivity and Correlation)
Example: Huntingtin Family (Sensitivity>=0.5, Specificity >=0.99) and Prolactin Family (Sensitivity>=0.5, Specificity >=0.99)
Example: Huntingtin Family (Sensitivity>=0.5, Specificity >=0.99) and Prolactin Family (Sensitivity>=0.5, Specificity >=0.99)
Protein Search
Pattern Search
Search if a pattern, identified by PROSITE accession number or in PROSITE format, is stored in AmypDB
Example: 'L-[DEGHKNPQRSTY]-x-L-[DEHKNQR]-C-[DEGHKNPQRSTY]-x(2)-[DEHKNPQY]'
Example: 'L-[DEGHKNPQRSTY]-x-L-[DEHKNQR]-C-[DEGHKNPQRSTY]-x(2)-[DEHKNPQY]'